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3. The contribution of meta-omics to soil quality assessment
3.1 Challenges and obstacles to making meta-omics an operational bio-indicator
Meta-omics" and associated recent technological developments have made it possible to better characterize the taxonomic diversity, metabolic potential, expression and activity of soil microbial communities. However, the use of a "meta-omics" approach in research does not make it a proven technique. It must first meet a certain number of criteria, such as :
its levels of repeatability, sensitivity and reproducibility, which must be known and controlled;
standardization of procedures associated with the use of this technique;
routine application.
It's also important...
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The contribution of meta-omics to soil quality assessment
Future developments
Bibliography
Websites
ISO standards : http://www.iso.org/committee/54366/x/catalogue/
AgrInnov project : http://revue-sesame-inra.fr/agrinnov-reva-un-reseau-pour-experimenter-de-bonnes-pratiques-agricoles-3/
...Standards and norms
- Soil quality – Sampling – Part 1: Guidelines for establishing sampling programs. - ISO 10381-1 - 2002
- Soil quality – Method for directly extracting DNA from soil samples. - ISO 11063 - 2012
- Soil quality – Estimation of microbial gene sequence abundance by quantitative polymerase chain reaction (PCR) amplification from DNA extracted directly from soil. - ISO 17601 - 2016
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Agrosolutions : http://www.agrosolutions.com/
Ambion (distributed by ThermoFisher) : http://www.thermofisher.com/fr/fr/home/brands/invitrogen/ambion/ambion-product-list.html
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