Overview
FrançaisABSTRACT
Macromolecular crystallography is the method of choice for the structure determination of soluble biological samples at atomic resolution. X-ray Crystallography has enabled the structure determination of several tens of thousands of biological macromolecules in a wide range of size and complexity. The specific properties of macromolecular crystals requires adapted crystallization and data collection protocols which are highlighted in this article.
Read this article from a comprehensive knowledge base, updated and supplemented with articles reviewed by scientific committees.
Read the articleAUTHOR
-
Jean CAVARELLI: Professor of Structural Biology University of Strasbourg Department of Integrative Structural Biology IGBMC,CNRS UMR 7104-Inserm U 1258, Strasbourg-Illkirch, France
INTRODUCTION
Single-crystal X-ray diffraction is the method par excellence for studying biological macromolecules at the atomic scale. The process of determining a biological macromolecule structure by X-ray diffraction on crystals is schematically divided into six steps:
obtaining the macromolecule in its pure state (or macromolecules in the case of assemblies);
crystallization ;
diffraction data collection ;
phasing ;
construction of the crystallographic structure by interpretation of electron density maps ;
structure refinement and validation.
The last three steps are described in
This article deals with the first steps in this process, right through to obtaining diffraction data. These stages are characterized by miniaturization and extensive automation, with increasingly reduced human intervention. The intrinsic physico-chemical properties of biological macromolecules give rise to crystals with large crystal lattice parameters and generally limited diffraction power compared with the standard for small organic molecules. As of December 2018, 57% of the crystallographic structures deposited in the RCSB PDB database have a diffraction limit of less than 2 Å, and only 13% have a diffraction limit better than 1.6 Å. This calls for appropriate methods and techniques throughout the crystallographic process. This methodology, specific to biological macromolecules, will be presented in this article.
Exclusive to subscribers. 97% yet to be discovered!
You do not have access to this resource.
Click here to request your free trial access!
Already subscribed? Log in!
The Ultimate Scientific and Technical Reference
KEYWORDS
synchroton source | detector | crystal | X-ray | macromolecules
This article is included in
Bioprocesses and bioproductions
This offer includes:
Knowledge Base
Updated and enriched with articles validated by our scientific committees
Services
A set of exclusive tools to complement the resources
Practical Path
Operational and didactic, to guarantee the acquisition of transversal skills
Doc & Quiz
Interactive articles with quizzes, for constructive reading
Biocrystallography
Bibliography
Bibliography
Websites
Integrative structural biology and technology platforms
on a European scale, Instruct-ERIC https://www.structuralbiology.eu
a French infrastructure, FRISBI http://frisbi.eu
Structural biology knowledgebase...
Software tools
Collecting data
HKL3000 http://www.hkl-xray.com/hkl-3000
...Exclusive to subscribers. 97% yet to be discovered!
You do not have access to this resource.
Click here to request your free trial access!
Already subscribed? Log in!
The Ultimate Scientific and Technical Reference